MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,736
rRNA: 15
tRNA: 60
tmRNA: 1
Total number of protein coding genes annotated/found:
2,715
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5041|JADGLJ010000027.1
MBF0814781.1
Genome Viewer
NA
AA
358/119
1-360
E domain-containing protein
SEQF5041|JADGLJ010000022.1
MBF0814778.1
Genome Viewer
NA
AA
403/134
26-428
alpha/beta hydrolase
SEQF5041|JADGLJ010000035.1
MBF0814787.1
Genome Viewer
NA
AA
244/81
1-245
class A beta-lactamase
SEQF5041|JADGLJ010000010.1
MBF0814656.1
Genome Viewer
NA
AA
1788/596
1-1789
PRD domain-containing protein
SEQF5041|JADGLJ010000010.1
MBF0814657.1
Genome Viewer
NA
AA
471/157
1792-2262
transcriptional regulator GutM
SEQF5041|JADGLJ010000010.1
MBF0814658.1
Genome Viewer
NA
AA
552/184
2250-2801
PTS glucitol/sorbitol transporter subunit IIC
SEQF5041|JADGLJ010000010.1
MBF0814659.1
Genome Viewer
NA
AA
1014/338
2812-3825
PTS glucitol/sorbitol transporter subunit IIB
SEQF5041|JADGLJ010000010.1
MBF0814660.1
Genome Viewer
NA
AA
351/117
3843-4193
PTS glucitol/sorbitol transporter subunit IIA
SEQF5041|JADGLJ010000010.1
MBF0814661.1
Genome Viewer
NA
AA
1254/418
6763-5510
ATP-grasp domain-containing protein
SEQF5041|JADGLJ010000010.1
MBF0814662.1
Genome Viewer
NA
AA
318/106
7278-7595
winged helix-turn-helix transcriptional regulator
SEQF5041|JADGLJ010000010.1
MBF0814663.1
Genome Viewer
NA
AA
951/317
7698-8648
alpha/beta hydrolase
SEQF5041|JADGLJ010000010.1
MBF0814664.1
Genome Viewer
NA
AA
921/307
8750-9670
NAD-dependent epimerase/dehydratase family protein
SEQF5041|JADGLJ010000010.1
MBF0814665.1
Genome Viewer
NA
AA
690/230
9675-10364
type 1 glutamine amidotransferase domain-containing protein
SEQF5041|JADGLJ010000010.1
MBF0814666.1
Genome Viewer
NA
AA
750/250
11798-11049
DeoR/GlpR transcriptional regulator
SEQF5041|JADGLJ010000010.1
MBF0814667.1
Genome Viewer
NA
AA
756/252
11942-12697
ABC transporter ATP-binding protein
SEQF5041|JADGLJ010000010.1
MBF0814668.1
Genome Viewer
NA
AA
1626/542
12687-14312
ABC transporter permease subunit
SEQF5041|JADGLJ010000010.1
MBF0814669.1
Genome Viewer
NA
AA
1002/334
14313-15314
extracellular solute-binding protein
SEQF5041|JADGLJ010000010.1
MBF0814670.1
Genome Viewer
NA
AA
1095/365
15328-16422
2-aminoethylphosphonate--pyruvate transaminase
SEQF5041|JADGLJ010000010.1
MBF0814671.1
Genome Viewer
NA
AA
789/263
16425-17213
phosphonoacetaldehyde hydrolase
SEQF5041|JADGLJ010000010.1
MBF0814672.1
Genome Viewer
NA
AA
555/185
18519-17965
TetR/AcrR family transcriptional regulator
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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